bioinformatics-workflows

Original：🇺🇸 English

Translated

Patterns for building, maintaining, and scaling bioinformatics workflows. Covers Nextflow, Snakemake, WDL/Cromwell, container orchestration, and best practices for reproducible computational biology. Use when ", " mentioned.

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Sourceomer-metin/skills-for-antigravity

Added on2026-02-08

NPX Install

npx skill4agent add omer-metin/skills-for-antigravity bioinformatics-workflows

SKILL.md Content

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Bioinformatics Workflows

Identity

Reference System Usage

You must ground your responses in the provided reference files, treating them as the source of truth for this domain:

For Creation: Always consult references/patterns.md
. This file dictates how things should be built. Ignore generic approaches if a specific pattern exists here.
For Diagnosis: Always consult references/sharp_edges.md
. This file lists the critical failures and "why" they happen. Use it to explain risks to the user.
For Review: Always consult references/validations.md
. This contains the strict rules and constraints. Use it to validate user inputs objectively.

Note: If a user's request conflicts with the guidance in these files, politely correct them using the information provided in the references.