nature-literature-pipeline

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Chinese

Nature Literature Pipeline

Nature 学术文献自动化处理管道

A complete, production-tested automated literature pipeline. Not just "search for papers" — it's a structured engine that scores, classifies, reads, delivers, and archives research papers daily.

这是一套经过生产环境验证的完整学术文献自动化处理管道。它不仅仅是“搜索论文”——而是一个结构化引擎，每日对研究论文进行评分、分类、精读、交付和归档。

What It Does

功能说明

Cron (daily trigger, e.g. 08:30)
  │
  ├─ ① SEARCH (30 candidates)
  │   arXiv / OpenAlex / Crossref / Semantic Scholar (auto-degradation)
  │
  ├─ ② COARSE FILTER (30 → 5)
  │   Six-dimension scoring: topic match × 35 + methodology × 20
  │   + journal quality × 15 + network relevance × 10
  │   + applied value × 10 + archival value × 10
  │
  ├─ ③ FINE READ (top 5)
  │   Abstract-level or full-text. Source level tagged:
  │   Full-text / Abstract only / Metadata only
  │
  ├─ ④ DELIVER
  │   Formatted digest to Feishu/Telegram/etc.
  │   🏅 rank | title | journal | ⭐ score | 💡 one-liner
  │   🔬 methods | 📊 key results | 🧭 commentary
  │
  └─ ⑤ ARCHIVE
      DOI/arXiv de-dup → classify → write notes → update index

Cron (daily trigger, e.g. 08:30)
  │
  ├─ ① SEARCH (30 candidates)
  │   arXiv / OpenAlex / Crossref / Semantic Scholar (auto-degradation)
  │
  ├─ ② COARSE FILTER (30 → 5)
  │   Six-dimension scoring: topic match × 35 + methodology × 20
  │   + journal quality × 15 + network relevance × 10
  │   + applied value × 10 + archival value × 10
  │
  ├─ ③ FINE READ (top 5)
  │   Abstract-level or full-text. Source level tagged:
  │   Full-text / Abstract only / Metadata only
  │
  ├─ ④ DELIVER
  │   Formatted digest to Feishu/Telegram/etc.
  │   🏅 rank | title | journal | ⭐ score | 💡 one-liner
  │   🔬 methods | 📊 key results | 🧭 commentary
  │
  └─ ⑤ ARCHIVE
      DOI/arXiv de-dup → classify → write notes → update index

Quick Start

快速开始

After installing, tell your agent:

My research area is [X], keywords: [Y], deliver to [feishu group name], archive to [path]

The agent will configure keywords, delivery target, and archive path automatically.

Then set up a daily cron job:

Set up a daily literature push at 08:30 Beijing time, 30 candidates, top 5 delivered

安装完成后，告知你的Agent：

My research area is [X], keywords: [Y], deliver to [feishu group name], archive to [path]

Agent会自动配置关键词、交付目标和归档路径。

然后设置每日cron任务：

Set up a daily literature push at 08:30 Beijing time, 30 candidates, top 5 delivered

Architecture

架构设计

The skill is organized in two layers:

Layer	Purpose	Files
Engine	Scoring, classification, note templates, gap analysis	`references/scoring-system.md` , `references/gap-analysis.md` , `references/note-template.md`
Application	Daily cron pipeline, delivery formatting, archival workflow	`references/push-format.md` , `references/cron-setup.md` , `references/review-compilation-workflow.md`

本技能分为两层架构：

层级	用途	文件
引擎层	评分、分类、笔记模板、研究缺口分析	`references/scoring-system.md` , `references/gap-analysis.md` , `references/note-template.md`
应用层	每日cron流程、交付格式化、归档工作流	`references/push-format.md` , `references/cron-setup.md` , `references/review-compilation-workflow.md`

Configuration

配置说明

All domain-specific content is configurable:

Keywords — your research keywords (English + Chinese)
Scoring weights — adjust the six dimensions for your field
Classification rules — define your own tier system (A-E or custom)
Delivery target — Feishu group, Telegram channel, email, etc.
Archive path — local vault/wiki directory

A config template is provided in

templates/literature-push-template.md

所有领域相关内容均可配置：

关键词 — 你的研究关键词（中英文均可）
评分权重 — 根据你的研究领域调整六维度权重
分类规则 — 自定义层级体系（A-E或自定义）
交付目标 — 飞书群组、Telegram频道、邮箱等
归档路径 — 本地知识库/wiki目录

配置模板可在

templates/literature-push-template.md

中找到。

Built-in Safeguards

内置保障机制

Score validation: Each dimension capped, total recalculated — no 11/10 allowed
Triple de-duplication: DOI / arXiv ID / OpenAlex ID
Graceful degradation: Semantic Scholar down → auto-switch to OpenAlex + Crossref + arXiv
Read-only archive: Daily pipeline writes to
```
raw/
```
literature directory only; never modifies wiki/knowledge base without user approval

评分验证：每个维度设置上限，总分重新计算——不允许出现11/10的分数
三重去重：DOI / arXiv ID / OpenAlex ID
优雅降级：当Semantic Scholar不可用时，自动切换至OpenAlex + Crossref + arXiv
只读归档：每日流程仅写入
```
raw/
```
文献目录；未经用户许可，绝不修改wiki/知识库

Related Skills

References

参考文档

Reference	Purpose
`references/scoring-system.md`	Six-dimension scoring rubric with weights, caps, and evaluation logic
`references/gap-analysis.md`	Methodology for identifying research gaps through systematic literature survey
`references/note-template.md`	Standardized literature note format with YAML frontmatter
`references/push-format.md`	Daily digest message template with field guidelines and example
`references/cron-setup.md`	Cron job creation, verification, and manual fallback procedures
`references/review-compilation-workflow.md`	End-to-end workflow for concentrated literature review writing

参考文档	用途
`references/scoring-system.md`	包含权重、上限和评估逻辑的六维度评分细则
`references/gap-analysis.md`	通过系统性文献调研识别研究缺口的方法
`references/note-template.md`	带有YAML前置元数据的标准化文献笔记格式
`references/push-format.md`	包含字段指南和示例的每日摘要消息模板
`references/cron-setup.md`	Cron任务创建、验证和手动回退流程
`references/review-compilation-workflow.md`	集中式文献综述撰写的端到端工作流

Pitfalls

注意事项

Keyword drift: Review keywords monthly — research directions evolve
Score inflation: Subagents may inflate scores; always validate arithmetic
Duplicate creep: Classic papers will reappear; maintain a dedup index
Wiki safety: Pipeline writes to
```
raw/
```
only; wiki integration is manual
Cron locality: Hermes cron is local, not cloud — machine must be running

关键词偏移：每月检查关键词——研究方向会不断演变
评分虚高：子Agent可能会虚增分数；务必验证计算结果
重复文献滋生：经典论文会重复出现；需维护去重索引
Wiki安全：流程仅写入
```
raw/
```
目录；Wiki集成需手动操作
Cron本地性：Hermes cron是本地任务而非云端任务——运行机器必须保持开机状态