Obsidian Manager Skill

Manage the user's Obsidian vault as a persistent second brain. Read existing knowledge, write new content, and search across years of highlights and notes.

Vault Configuration

Path:

~/Library/Mobile Documents/iCloud~md~obsidian/Documents/Personal_Notes/

Write Mode: Auto-create new files, confirm before updating existing files.

Vault Structure

Personal_Notes/
├── Geoffrey/              # Geoffrey-generated content
│   ├── Mission Control.md # Central dashboard (Dataview queries)
│   ├── Scheduled Tasks.md # Scheduler dashboard
│   ├── Research/          # Research task outputs
│   │   ├── Daily AI Briefings/  # Daily automated research
│   │   ├── {Project}/     # Other research projects
│   │   └── attachments/   # Research images
│   ├── Reports/           # Generated reports and artifacts
│   │   ├── PSD/           # Peninsula School District reports
│   │   │   ├── Discipline/    # Discipline reports and infographics
│   │   │   ├── Enrollment/    # Enrollment reports
│   │   │   ├── Tech Support/  # Tech support dashboards
│   │   │   └── {topic}/       # Other PSD topics
│   │   ├── HRG/           # Hat Rack Group (consulting LLC) reports
│   │   │   └── {topic}/       # HRG topics
│   │   ├── Personal/      # Personal reports
│   │   │   └── {topic}/       # Personal topics
│   │   └── {org}/         # Other organizations as needed
│   ├── Daily-Logs/        # Session summaries (YYYY-MM-DD.md)
│   ├── Learnings/         # Extracted patterns (YYYY-MM-DD-topic.md)
│   └── Decisions/         # Major decisions with rationale (YYYY-MM-DD-topic.md)
├── Meetings/              # Meeting notes (YYYY-MM-DD format)
├── People/                # Contact profiles with metadata
├── Readwise/              # Synced highlights (368 articles, 34 books)
│   ├── Articles/
│   ├── Books/
│   ├── Podcasts/
│   └── Tweets/
├── Snipd/                 # Podcast highlights (58+ episodes)
│   └── Data/              # Podcast folders > episodes
└── Templates/             # Note templates

CRITICAL: See CLAUDE.md "Obsidian Organizational Rules" section for:

Strict folder structure requirements
File naming conventions
Routing rules by content type
Validation checklist before writing

Always validate folder placement before writing any files to Geoffrey folder.

Scripts

All scripts use Python via

uv run

with inline dependencies.

Search Scripts

search.py - General Vault Search

bash

uv run scripts/search.py "query" [folder] [--limit N]

Search across the vault for keyword matches. Returns file paths and matching excerpts.

Examples:

bash

# Search entire vault
uv run scripts/search.py "prompt engineering"

# Search specific folder
uv run scripts/search.py "leadership" People

# Limit results
uv run scripts/search.py "AI" Readwise/Articles --limit 10

search-readwise.py - Search Highlights

bash

uv run scripts/search-readwise.py "query" [--author "name"] [--category articles|books|podcasts]

Search Readwise highlights by topic, author, or category.

Examples:

bash

# Search by topic
uv run scripts/search-readwise.py "second brain"

# Search specific author
uv run scripts/search-readwise.py "AI" --author "Andrej Karpathy"

# Search books only
uv run scripts/search-readwise.py "habits" --category books

search-snipd.py - Search Podcast Transcripts

bash

uv run scripts/search-snipd.py "query" [--show "podcast name"]

Search Snipd podcast transcripts and snips.

Examples:

bash

# Search all podcasts
uv run scripts/search-snipd.py "machine learning"

# Search specific show
uv run scripts/search-snipd.py "leadership" --show "Huberman Lab"

Creation Scripts

create-note.py - Create New Note

bash

uv run scripts/create-note.py "title" "content" [--folder Geoffrey/Research] [--tags tag1,tag2] [--related "[[Note]]"]

Create a new note with proper frontmatter and optional backlinks.

Examples:

bash

# Create research note
uv run scripts/create-note.py "AI Model Comparison" "Content here..." --folder Geoffrey/Research --tags research,ai

# Create with backlinks
uv run scripts/create-note.py "Meeting Notes" "Content..." --folder Meetings --related "[[John Smith]],[[Project Alpha]]"

open-in-obsidian.py - Open Note in Obsidian

bash

uv run scripts/open-in-obsidian.py "path/to/note.md"

Opens the specified note in Obsidian using Actions URI.

Content Routing

CRITICAL: When creating content, use these destinations. NEVER dump files directly into

Geoffrey/

- always use proper subfolders.

Content Type	Folder	Naming Pattern
Research results	`Geoffrey/Research/`	`YYYY-MM-DD-topic.md`
Reports	`Geoffrey/Reports/{org}/{topic}/`	Descriptive name with date
Images/Infographics	Same as parent report	`Descriptive Name YYYY-MM-DD.png`
Meeting notes	`Meetings/`	`Topic - YYYY-MM-DD.md`
Daily summaries	`Geoffrey/Daily-Logs/`	`YYYY-MM-DD.md`
Learnings	`Geoffrey/Learnings/`	`topic-slug.md`
Decisions	`Geoffrey/Decisions/`	`YYYY-MM-DD-decision.md`
Person updates	`People/`	Existing file name

Naming Rules:

All images/infographics MUST include date in filename

Format:

Descriptive Name YYYY-MM-DD.png

Descriptive Name YYYY-MM-DD to YYYY-MM-DD.png

for date ranges

Example:

Peninsula High School Discipline Report 2025-11-17 to 2025-11-20.png

Reports Folder Structure: Pattern:

Geoffrey/Reports/{organization}/{topic}/

Organizations:

PSD - Peninsula School District reports

```
Geoffrey/Reports/PSD/Discipline/
```
```
Geoffrey/Reports/PSD/Enrollment/
```
```
Geoffrey/Reports/PSD/Attendance/
```
```
Geoffrey/Reports/PSD/{topic}/
```

HRG - Hat Rack Group (consulting LLC) reports
- ```
Geoffrey/Reports/HRG/{topic}/
```
Personal - Personal reports
- ```
Geoffrey/Reports/Personal/{topic}/
```
{org} - Other organizations as needed

Frontmatter Standard

All Geoffrey-created notes should include:

yaml

---
created: 2025-11-23
tags: [geoffrey, research]
source: geoffrey
related:
  - "[[Related Note 1]]"
  - "[[Related Note 2]]"
---

When to Read from Vault

Before research tasks: Check if user has relevant Readwise highlights or existing notes
When people mentioned: Look up context in People folder
For meeting prep: Find past meetings and related notes
For context: Search Snipd transcripts for podcast discussions on topic

When to Write to Vault

After research: Save results to
```
Geoffrey/Research/
```
Learned patterns: Extract insights to
```
Geoffrey/Learnings/
```
Major decisions: Document with rationale in
```
Geoffrey/Decisions/
```
Session summaries: Optional daily logs to
```
Geoffrey/Daily-Logs/
```

Creating Backlinks

Always create backlinks to existing content:

Search before creating: Find related notes first
Use wiki-links:
```
[[Note Title]]
```
format
Add to frontmatter: List in
```
related:
```
field
Reference sources: Link to Readwise/Snipd sources when relevant

Example:

markdown

Based on insights from [[Readwise/Articles/Building a Second Brain]],
and discussed in [[Snipd/Data/Huberman Lab/episode-123]],
the key pattern is...

Readwise Content Format

Readwise notes have this structure:

yaml

---
Author: "Author Name"
Full Title: "Article Title"
Category: #articles
Summary: "AI-generated summary"
---

## Highlights
- Highlight text with optional tags like [[topic]]

Snipd Content Format

Snipd episodes have rich metadata:

yaml

---
episode_show: "Podcast Name"
episode_publish_date: 2024-01-15
mentioned_books: ["Book 1", "Book 2"]
snips_count: 5
---

### Snip 1
**Timestamp:** 00:15:30
> Quote text here

**Transcript:** Full context...

Actions URI Integration

Use Actions URI to interact with Obsidian app:

bash

# Open a note
open "obsidian://actions-uri/note/open?vault=Personal_Notes&file=Geoffrey/Research/note.md"

# Create and open
open "obsidian://actions-uri/note/create?vault=Personal_Notes&file=path&content=..."

Best Practices

Search before creating: Always check for existing content
Link generously: Create connections between notes
Use consistent tags: Match existing tag patterns
Keep notes atomic: One idea per note in Learnings
Include sources: Always cite Readwise/Snipd sources
Respect existing structure: Don't reorganize user's folders

Output Format

When completing Obsidian operations:

markdown

## Summary
What was done

## Files
- Created: `path/to/new.md`
- Updated: `path/to/existing.md` (if confirmed)

## Related Content Found
- [[Relevant Note 1]] - why it's relevant
- [[Relevant Note 2]] - why it's relevant

## Next Steps
- Recommendations if any

obsidian-manager

NPX Install

Tags

SKILL.md Content

Obsidian Manager Skill

Vault Configuration

Vault Structure

Scripts

Search Scripts

search.py - General Vault Search

search-readwise.py - Search Highlights

search-snipd.py - Search Podcast Transcripts

Creation Scripts

create-note.py - Create New Note

open-in-obsidian.py - Open Note in Obsidian

Content Routing

Frontmatter Standard

When to Read from Vault

When to Write to Vault

Creating Backlinks

Readwise Content Format

Snipd Content Format

Actions URI Integration

Best Practices

Output Format