from scientific_paper_figure_generator import PaperFigureGenerator

# Create multi-panel figure
fig_gen = PaperFigureGenerator(style='nature')
fig_gen.add_panel(data=df1, plot_type='bar', label='a')
fig_gen.add_panel(data=df2, plot_type='line', label='b')
fig_gen.annotate_significance(panel='a', x1=0, x2=1, p_value=0.001)
fig_gen.save('figure1.pdf', dpi=300)

# Create figure from data
python scientific_paper_figure_generator.py --data results.csv --plot bar --style nature --output figure1.pdf

# Multi-panel figure
python scientific_paper_figure_generator.py --panels panel_a.csv,panel_b.csv --layout 1x2 --output figure2.pdf