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Found 5 Skills
Execute a plan file or Beads epic systematically with git setup, task tracking, quality checks, and commit workflow. Use when implementing a plan, working through a spec, following documented steps, or executing a Beads issue ID (e.g., bd-123, gno-45, app-12).
Git worktree management for parallel SPEC development with isolated workspaces, automatic branch registration, and seamless MoAI-ADK integration. Use when setting up parallel development environments, creating isolated SPEC workspaces, managing git worktrees, or working on multiple features simultaneously. Do NOT use for regular git operations like commit or merge (use manager-git agent instead).
Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.
Automate ML workflows with Airflow, Kubeflow, MLflow. Use for reproducible pipelines, retraining schedules, MLOps, or encountering task failures, dependency errors, experiment tracking issues.
Use this skill when managing git branches, releases, or hotfixes according to the Gitflow workflow. It enforces naming conventions and synchronization policies.