Search Results: sequencing-data

Found 2 Skills

Data Processinganthropics/knowledge-work...

nextflow-development

Run nf-core bioinformatics pipelines (rnaseq, sarek, atacseq) on sequencing data. Use when analyzing RNA-seq, WGS/WES, or ATAC-seq data—either local FASTQs or public datasets from GEO/SRA. Triggers on nf-core, Nextflow, FASTQ analysis, variant calling, gene expression, differential expression, GEO reanalysis, GSE/GSM/SRR accessions, or samplesheet creation.

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10 scripts/Checked

Data Processingfmschulz/omics-skills

bio-reads-qc-mapping

Ingest, QC, and map reads with reproducible outputs. Use for raw read processing and coverage stats.

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