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Found 11 Skills
DICOM and NIfTI medical image processing pipeline. Triggers on DICOM, NIfTI, dcm2niix, de-identification, pydicom, DICOM header, conversion, anonymization, BIDS, DICOM tags, medical image format conversion, "DICOM to NIfTI", "burned-in PHI", "SeriesInstanceUID", "nibabel", "DICOM anonymization".
Reasoning skill for medical imaging study design and biomarker selection. Use when the user asks to plan an imaging study, choose a preprocessing strategy, select an imaging biomarker, design a radiomics pipeline, handle DICOM de-identification, plan longitudinal imaging analysis, or pick a registration target. Triggers include "imaging study", "preprocessing strategy", "DICOM de-identification", "imaging biomarker", "radiomics", "longitudinal imaging", "registration target", "MNI vs native space", "scanner harmonization", "ComBat", "IBSI", "multi-site imaging", "burned-in PHI", "test-retest reliability", "volumetric biomarker", "diffusion MRI", "perfusion imaging", "fMRI study design", "spectroscopy biomarker".
Python package for working with DICOM files. It allows you to read, modify, and write DICOM data in a Pythonic way. Essential for medical imaging processing, clinical data extraction, and AI in radiology.
Used for converting one CT DICOM series folder to a HU NIfTI volume with affine evidence. Not for multi-frame DICOM or clinical use.
Used for header-only preflight of one DICOM series folder before conversion or inference. Not for de-identification or clinical clearance.
Used for extracting selected metadata from one DICOM file and flagging standard-tag PHI presence. Not for anonymization or clinical use.
Use this skill when working with Brain Imaging Data Structure (BIDS) datasets: organizing neuroscience and biomedical data (MRI, EEG, MEG, iEEG, PET, microscopy, NIRS, motion capture, EMG, MR spectroscopy, behavioral), querying BIDS layouts, validating compliance, converting DICOM to BIDS, writing metadata sidecars, or creating BIDS derivatives.
Python library for working with DICOM (Digital Imaging and Communications in Medicine) files. Use this skill when reading, writing, or modifying medical imaging data in DICOM format, extracting pixel data from medical images (CT, MRI, X-ray, ultrasound), anonymizing DICOM files, working with DICOM metadata and tags, converting DICOM images to other formats, handling compressed DICOM data, or processing medical imaging datasets. Applies to tasks involving medical image analysis, PACS systems, radiology workflows, and healthcare imaging applications.
Computational pathology toolkit for analyzing whole-slide images (WSI) and multiparametric imaging data. Use this skill when working with histopathology slides, H&E stained images, multiplex immunofluorescence (CODEX, Vectra), spatial proteomics, nucleus detection/segmentation, tissue graph construction, or training ML models on pathology data. Supports 160+ slide formats including Aperio SVS, NDPI, DICOM, OME-TIFF for digital pathology workflows.
Operational arsenal for authorized external red-team and bug-bounty recon. Concrete probes, wordlists, regexes, dorks, curl one-liners for: subdomain enum, GraphQL/Swagger/REST discovery, identity fabric (Entra/Okta/ADFS/Google/SAML/M365 deep — Teams/SharePoint/OneDrive), cloud bucket enum (S3/GCS/Azure), CDN/WAF bypass, origin discovery, vendor fingerprinting (Citrix/F5/Pulse/Fortinet/PaloAlto/Cisco/VMware), CI/CD exposure, 48-pattern secret-scan catalog (AWS/GCP/GitHub/Stripe/Slack/Anthropic/OpenAI/Atlassian/DataDog/npm/PyPI), Postman workspaces, breach correlation (HudsonRock/HIBP/DeHashed/IntelX), TLS/JA3 audit, certificate transparency, JS endpoint extraction, package registry leaks, mobile/APK recon, sat imagery, sector-specific recon (healthcare DICOM, finance SWIFT, ICS/SCADA Modbus/BACnet). Detail content in 15 modular reference files, loaded on demand. Use for any authorized recon: scoping, asset discovery, attack-path mapping, secret triage, severity scoring.
Query and download public cancer imaging data from NCI Imaging Data Commons using idc-index. Use for accessing large-scale radiology (CT, MR, PET) and pathology datasets for AI training or research. No authentication required. Query by metadata, visualize in browser, check licenses.