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Found 278 Skills
Prioritize drug targets from a ranked gene list (e.g., scRNA-seq DE output) by orchestrating parallel API queries against UniProt, OpenTargets (with integrated DepMap CRISPR essentiality + gnomAD constraint), PubMed, the Human Protein Atlas (HPA), and ChEMBL tool compounds, then re-ranking by a composite score combining protein localization, druggability, disease genetics, tissue specificity (safety), focus-cell-type expression, CRISPR essentiality, LoF safety constraint, and research maturity. Use whenever the user wants to filter, triage, prioritize, or "do due diligence" on a list of candidate genes for drug discovery, especially after a DE / DEG analysis when they say things like "which of these should I follow up on", "filter for druggable targets", "make a target dossier", "rank these for tractability", "annotate these genes for druggability", or "build a target report". Trigger even when the user says just "filter these candidate genes" or hands over a CSV from a DE pipeline.
Auto-generates a changelog from git commits, sprint data, and design documents. Produces both internal and player-facing versions.
Vendor-neutral skill to compare forecast assumptions over time and flag high-impact drift.
Genomic file toolkit. Read/write SAM/BAM/CRAM alignments, VCF/BCF variants, FASTA/FASTQ sequences, extract regions, calculate coverage, for NGS data processing pipelines.
High-performance toolkit for genomic interval analysis in Rust with Python bindings. Use when working with genomic regions, BED files, coverage tracks, overlap detection, tokenization for ML models, or fragment analysis in computational genomics and machine learning applications.
Use this skill when the user wants to build tool/scripts or achieve a task where using data from the Hugging Face API would help. This is especially useful when chaining or combining API calls or the task will be repeated/automated. This Skill creates a reusable script to fetch, enrich or process data.
Search ClinicalTrials.gov with natural language queries. Find clinical trials, enrollment, and outcomes using Valyu semantic search.
Run regression analyses in Stata with publication-ready output tables.
Access USPTO APIs for patent/trademark searches, examination history (PEDS), assignments, citations, office actions, TSDR, for IP analysis and prior art searches.
Build event streaming and real-time data pipelines with Kafka, Pulsar, Redpanda, Flink, and Spark. Covers producer/consumer patterns, stream processing, event sourcing, and CDC across TypeScript, Python, Go, and Java. When building real-time systems, microservices communication, or data integration pipelines.
Extract and analyze YouTube video content (transcripts + metadata). Use when the user explicitly requests to analyze, summarize, extract wisdom from, or get context from a YouTube video. Supports wisdom extraction, summary, Q&A prep, key quotes, and custom analysis. Does NOT auto-trigger on YouTube URLs - only when analysis is explicitly requested.
Apache Spark distributed computing. Use for big data processing.