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Found 33 Skills
Must be used when users explicitly request "recommend submission journals", "help me choose SCI journals for my paper", "which journals is this manuscript suitable for", "journal matching/journal selection/submission suggestions". Applicable to scenarios where users provide full text, abstracts, Markdown, LaTeX, PDF, Word, or mixed materials; This skill will first use the built-in `2023IF.xlsx` to perform minimum hard filtering to generate a candidate pool based on the manuscript and user preferences, then the host model will independently plan Set1/Set2/Set3, verify the scope / quality / PubMed papers of the last 3 months via the internet, and finally output a Markdown journal selection report sorted by recommendation level. ⚠️ Not applicable: Users only want to polish papers, only want to translate abstracts, or only ask about the official website information of a single journal without needing systematic journal selection.
Direct PubMed and NCBI E-utilities search workflows for biomedical literature, MeSH queries, PMID lookup, citation retrieval, and API-backed literature monitoring.
Primary Python toolkit for molecular biology. Preferred for Python-based PubMed/NCBI queries (Bio.Entrez), sequence manipulation, file parsing (FASTA, GenBank, FASTQ, PDB), advanced BLAST workflows, structures, phylogenetics. For quick BLAST, use gget. For direct REST API, use pubmed-database.
Complete biomedical information search combining PubMed, preprints, clinical trials, and FDA drug labels. Powered by Valyu semantic search.
Comprehensive scientific literature search across PubMed, arXiv, bioRxiv, medRxiv. Natural language queries powered by Valyu semantic search.
This skill should be used when user asks to "search for papers", "find research papers", "search arXiv", "search PubMed", "find academic papers", "search IEEE", "search Scopus", or "look up scientific literature".
Search 10 academic paper databases via REST APIs for research papers, preprints, and scholarly articles. Covers PubMed, PMC (full text), bioRxiv, medRxiv, arXiv, OpenAlex, Crossref, Semantic Scholar, CORE, Unpaywall. Use when searching for papers, citations, DOI/PMID lookups, abstracts, full text, open access, preprints, citation graphs, author search, or any scholarly literature query. Triggers on mentions of any supported database or requests like "find papers on X" or "look up this DOI".
Search academic papers across arXiv, PubMed, Semantic Scholar, bioRxiv, medRxiv, Google Scholar, and more. Get BibTeX citations, download PDFs, analyze citation networks. Use for literature reviews, finding papers, and academic research.
Evidence-based Drug-Drug Interaction (DDI) assessment skill modeled after the Micromedex Drug-Reax methodology. Trigger this skill whenever the user types /drug-drug, mentions "drug interaction", "DDI", "drug-drug", "can I take X with Y", "interaction between", "交互作用", "併用", or asks whether two medications can be used together. This skill performs systematic literature retrieval via PubMed, CrossRef, and WebSearch, then produces a structured assessment report with Severity, Documentation, Onset, Mechanism, Clinical Effects, and Management — mirroring the Micromedex Drug-Reax classification framework. Even casual questions like "is it safe to combine A and B" should trigger this skill.
Academic paper search and metrics analysis. Searches arXiv, PubMed, and Web of Science simultaneously with journal impact factor data. Triggers on requests to search for papers or find literature.
Prioritize drug targets from a ranked gene list (e.g., scRNA-seq DE output) by orchestrating parallel API queries against UniProt, OpenTargets (with integrated DepMap CRISPR essentiality + gnomAD constraint), PubMed, the Human Protein Atlas (HPA), and ChEMBL tool compounds, then re-ranking by a composite score combining protein localization, druggability, disease genetics, tissue specificity (safety), focus-cell-type expression, CRISPR essentiality, LoF safety constraint, and research maturity. Use whenever the user wants to filter, triage, prioritize, or "do due diligence" on a list of candidate genes for drug discovery, especially after a DE / DEG analysis when they say things like "which of these should I follow up on", "filter for druggable targets", "make a target dossier", "rank these for tractability", "annotate these genes for druggability", or "build a target report". Trigger even when the user says just "filter these candidate genes" or hands over a CSV from a DE pipeline.
Use whenever the user wants to obtain, download, or fetch a paper's PDF — given a DOI, an arXiv id, a paper title, a citation, or a list of DOIs. Trigger on phrases like "download this paper", "find the PDF for [DOI]", "grab me the [Nature/bioRxiv/arXiv] paper on X", "get the open-access version", "I need this article", or any bulk/batch paper download request, even when the user doesn't explicitly say "PDF" or "DOI". Resolves via Unpaywall → Semantic Scholar → arXiv → PubMed Central → bioRxiv/medRxiv → publisher direct (institutional opt-in) → Sci-Hub mirrors as last-resort fallback.