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Found 14 Skills
Expert knowledge for AI deep research — methodology, source evaluation, search optimization, cross-referencing, synthesis, and citation formats
Identifies Oracle-to-PostgreSQL migration risks by cross-referencing code against known behavioral differences (empty strings, refcursors, type coercion, sorting, timestamps, concurrent transactions, etc.). Use when planning a database migration, reviewing migration artifacts, or validating that integration tests cover Oracle/PostgreSQL differences.
Retrieves chemical compound information from PubChem and ChEMBL with disambiguation, cross-referencing, and quality assessment. Creates comprehensive compound profiles with identifiers, properties, bioactivity, and drug information. Use when users need chemical data, drug information, or mention PubChem CID, ChEMBL ID, SMILES, InChI, or compound names.
Consult this skill when searching or navigating stored knowledge. Use when searching for stored knowledge, cross-referencing concepts, discovering connections, retrieving from palaces, finding past PR decisions. Do not use when creating new palace structures - use memory-palace-architect. DO NOT use when: processing new external resources - use knowledge-intake.
Iterative multi-round deep research with structured analysis frameworks. Use for: deep research on a topic, compare X vs Y, landscape analysis, evaluate options for a decision, deep dive into a technology, comprehensive research with cross-referencing. Triggers: deep research, compare, landscape, evaluate, deep dive, comprehensive research, which is better, should we use.
Analyze a complete literary work into a structured Basic Memory knowledge graph. Covers schema design, entity seeding, chapter-by-chapter processing, cross-referencing, validation, and visualization.
Compile an agent-optimized changelog by cross-referencing git history with plans and documentation. Use when asked to "update changelog", "compile history", "document project evolution", or proactively after major milestones, architectural changes, or when stale/deprecated information is detected that could confuse coding agents.
Access UniProt for protein sequence and annotation retrieval. Use this skill when: (1) Looking up protein sequences by accession, (2) Finding functional annotations, (3) Getting domain boundaries, (4) Finding homologs and variants, (5) Cross-referencing to PDB structures. For structure retrieval, use pdb. For sequence design, use proteinmpnn.
Use this method when fact-checking drafts that include dates, quantities, or causal claims by cross-referencing multiple independent sources.
Write newsletter articles for The Hybrid Builder (chatwithgpt.substack.com) with intelligent cross-referencing of the full article archive. Includes sitemap-based article cache with theme indexing, reference suggestions, session transcript export, and cover image generation. Use when asked to write a blog post, article, or newsletter about a collaboration or technical topic.
Researches investigative articles, interviews, and news coverage. Use when research needs journalistic sources for cross-referencing or additional context.
Documentation architecture for this repository. Use when creating, updating, or reviewing README.md, CONTRIBUTING.md, or docs/ files. Covers separation of concerns, vendor documentation standards, cross-references, and validation.